Home Failure Case Library Protein concentration is too low
Protein Extraction severe

Protein concentration is too low

Symptom
Nanodrop reads A280 ≈ 0.09, concentration ≈ 0.05 mg/mL; SDS-PAGE shows very faint overall bands; BCA quantification confirms low yield.
Common Causes
  1. 1 Tissue / cell input was insufficient
  2. 2 Lysis was incomplete — protein not released
  3. 3 Lysis buffer volume or ratio was wrong
  4. 4 Protein loss during centrifugation/transfer
  5. 5 Target protein has intrinsically low expression
Solutions
  1. 1 Increase sample input
  2. 2 Lyse thoroughly on ice (vortex, sonication, or repeated pipetting)
  3. 3 Optimize lysis-buffer volume relative to sample mass (e.g. increase RIPA volume)
  4. 4 Optimize centrifugation conditions to avoid pellet sticking
  5. 5 For low-abundance targets, enrich (IP, affinity capture) or use a more sensitive detection method
Related Video (4)
Cell Signaling Technology
Western Blotting Protocol
Bilibili (China-Accessible Mirrors) ★ 95
Western blot full protocol: Protein extraction to chemiluminescence
"Complete hands-on Western blot workflow explicitly covering protein extraction from animal tissue samples, BCA quantification, and troubleshooting—directly addresses the failure case of low protein yi"
Bilibili (China-Accessible Mirrors) ★ 90
Western blot hands-on: Protein extraction through detection
"Step-by-step protein extraction and Western blot protocol with emphasis on troubleshooting common pitfalls, providing practical guidance on optimizing extraction yield and quality."
Bio-Rad Laboratories ★ 72
SDS-PAGE of Fish Muscle
"SDS-PAGE demonstration using Bio-Rad kit shows how to interpret faint band patterns and serves as a visual reference for detecting low-concentration protein samples."
Source: xiaohongshu.com ↗
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