Home › Cell Biology › Assessing Autophagic Flux by Measuring LC3, p62, and LAMP1 Co-localization Using Multispectral Imaging Flow Cytometry
Cell Biology JoVE (Open Access) Citable · DOI

Assessing Autophagic Flux by Measuring LC3, p62, and LAMP1 Co-localization Using Multispectral Imaging Flow Cytometry

DOI: 10.3791/55637-v
What you'll learn
  • ✓ Label Jurkat cells for LC3, p62, and LAMP1
  • ✓ Acquire multiplexed images using multispectral imaging flow cytometry
  • ✓ Quantify autophagy marker co-localization with bright detail similarity
  • ✓ Perform LC3 spot counting for autophagic flux assessment
Protocol

Biopharma Insights Here, multispectral imaging flow cytometry with an analytical feature that compares bright detail images of 3 autophagy markers and quantifies their co-localization, along with LC3 spot counting, was used to measure autophagy in an objective, quantitative, and statistically robust manner.

Difficulty
advanced
Total time
~2 days (labeling, acquisition, and analysis per sample set)
Model organism
Jurkat cells (human T lymphocyte cell line)
Biosafety
BSL-2

Steps

1
Label Jurkat cells for autophagy markers

Stain Jurkat cells with fluorescent antibodies or probes against LC3, p62, and LAMP1 to enable multiplexed detection.

▶ 00:42
2
Acquire cells on multispectral imaging flow cytometer

Run labeled samples on the MIFC instrument to capture bright detail images of each autophagy marker.

▶ 02:18
3
Analyze co-localization and LC3 spots

Use the analytical feature to compare bright detail images, quantify marker co-localization, and count LC3 spots.

▶ 03:43
4
Interpret representative MIFC results

Review representative analyses demonstrating objective, quantitative measurement of autophagic flux.

▶ 08:35
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