Home Botany Quantifying the Activity of cis-Regulatory Elements in the Mouse Retina by Explant Electroporation
Botany JoVE (Open Access) Citable · DOI

Quantifying the Activity of cis-Regulatory Elements in the Mouse Retina by Explant Electroporation

DOI: 10.3791/2821-v
What you'll learn
  • Prepare DNA for retinal electroporation
  • Dissect mouse retinas for explant culture
  • Perform retinal explant electroporation
  • Analyze cis-regulatory element expression
Protocol

Biopharma Insights This protocol describes a simple and inexpensive way to quantify the activity of cis-regulatory elements (i.e., enhancer/promoters) in living mouse retinas via explant electroporation. DNA preparation, retinal dissection, electroporation, retinal explant culture, and post-fixation analysis and quantification are described.

Difficulty
intermediate
Total time
~1 day (including culture time)
Model organism
Mouse
Biosafety
BSL-1

Steps

1
Collect mouse eyes

Enucleate the mouse eyes carefully to preserve retinal tissue integrity for subsequent dissection.

▶ 01:30
2
Dissect the retina

Isolate the retina from the eye cup, ensuring clean separation from the retinal pigment epithelium and other surrounding tissues.

▶ 02:43
3
Prepare for electroporation

Mount the isolated retina on a membrane and position the electrodes for optimal DNA delivery.

▶ 03:58
4
Electroporate the retinal explants

Apply electrical pulses to introduce the DNA construct into the retinal cells.

▶ 04:34
5
Culture electroporated retinas

Transfer the electroporated retinal explants to culture medium and maintain them under appropriate conditions for gene expression.

▶ 05:27
6
Visualize reporter expression in retinal cells

Fix and process the retinal explants to visualize the reporter gene driven by the cis-regulatory element.

▶ 06:23
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